STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017533PX domain-containing protein. (285 aa)    
Predicted Functional Partners:
CCH79_00009024
Uncharacterized protein.
    
 0.985
CCH79_00002920
PX domain-containing protein.
  
 
0.945
CCH79_00016113
PX domain-containing protein.
  
 
0.945
ENSGAFP00000003924
VPS35 retromer complex component.
   
 
 0.810
CCH79_00001485
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.794
CCH79_00007746
PX domain-containing protein.
   
 0.794
ENSGAFP00000003077
Si:dkey-28n18.9.
   
 0.793
CCH79_00007786
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.787
CCH79_00000610
Fibronectin type-II domain-containing protein.
    
 0.696
ENSGAFP00000004273
Vesicle-associated membrane protein 1.
    
 0.693
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.