Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020274Uncharacterized protein. (430 aa)    
Predicted Functional Partners:
CCH79_00007692
Ipi1_N domain-containing protein.
   
 0.999
CCH79_00006402
CLP1_P domain-containing protein.
   
 0.998
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.997
CCH79_00011530
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
  
 0.993
CCH79_00001855
WD_REPEATS_REGION domain-containing protein.
  
 0.990
CCH79_00000308
Brix domain-containing protein.
   
 
 0.986
CCH79_00020797
RRM domain-containing protein.
   
 
 0.986
CCH79_00001010
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.984
CCH79_00009777
OBG-type G domain-containing protein.
   
 
 0.983
ENSGAFP00000010650
Guanine nucleotide binding protein-like 3 (nucleolar).
  
 0.983
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (20%) [HD]