Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001832Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
CCH79_00010616
Uncharacterized protein.
      
 0.833
CCH79_00014861
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
      
 0.725
CCH79_00008140
AMP-binding domain-containing protein.
      
 0.713
CCH79_00015576
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.687
CCH79_00006570
TNFR-Cys domain-containing protein.
      
 0.613
ENSGAFP00000000839
annotation not available
      
 0.603
CCH79_00014359
Uncharacterized protein; Belongs to the peptidase M16 family.
      
 0.592
CCH79_00011677
RRM domain-containing protein.
      
 0.570
CCH79_00009860
Uncharacterized protein.
      
 0.556
CCH79_00003567
Uncharacterized protein.
      
 0.556
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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