Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001162Visual system homeobox 1 homolog, chx10-like. (149 aa)    
Predicted Functional Partners:
ENSGAFP00000001664
Atonal bHLH transcription factor 7.
      
 0.716
CCH79_00014269
Uncharacterized protein.
   
  
 0.638
ENSGAFP00000031309
Basic helix-loop-helix family, member e23.
   
  
 0.629
CCH79_00017344
BHLH domain-containing protein.
      
 0.619
CCH79_00006982
Fork-head domain-containing protein.
      
 0.616
CCH79_00009203
POU domain protein.
   
  
 0.597
CCH79_00008632
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
   0.534
CCH79_00007597
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
   0.534
CCH79_00004197
Ubiquitin carboxyl-terminal hydrolase.
    
   0.534
ENSGAFP00000011015
Ubiquitin specific peptidase 12b.
    
   0.534
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (16%) [HD]