STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001162Visual system homeobox 1 homolog, chx10-like. (149 aa)    
Predicted Functional Partners:
ENSGAFP00000001664
Atonal bHLH transcription factor 7.
   
  
 0.607
CCH79_00000669
Glutamine synthetase.
      
 0.593
CCH79_00011042
Glutamine synthetase.
      
 0.593
ENSGAFP00000031719
Glutamate-ammonia ligase (glutamine synthase) a.
      
 0.593
CCH79_00017340
Alpha-carbonic anhydrase domain-containing protein.
      
 0.578
CCH79_00017344
BHLH domain-containing protein.
   
  
 0.547
CCH79_00014269
Uncharacterized protein.
   
  
 0.523
CCH79_00004194
Uncharacterized protein.
      
 0.481
CCH79_00017562
Uncharacterized protein.
      
 0.481
ISL2
Uncharacterized protein.
   
  
 0.428
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.