STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC6ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (885 aa)    
Predicted Functional Partners:
CCH79_00004132
Uncharacterized protein; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.786
ENSGAFP00000004231
Protein kinase C, beta a.
   
 0.679
PRKCB
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.679
CCH79_00010870
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.679
ENSGAFP00000023838
Protein kinase C, alpha, a.
   
 0.679
ENSGAFP00000030053
Protein kinase C, alpha, b.
   
 0.679
ENSGAFP00000005820
annotation not available
   
 0.655
ENSGAFP00000009062
annotation not available
   
 0.655
CCH79_00004194
Uncharacterized protein.
   
 0.655
MPDZ
Uncharacterized protein.
   
 0.655
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.