Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001175annotation not available (353 aa)    
Predicted Functional Partners:
CCH79_00002477
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.933
CCH79_00007439
HIT domain-containing protein.
    
   0.730
CCH79_00019068
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.699
CCH79_00013703
RING-type domain-containing protein.
    
 0.683
CCH79_00015654
DCN1-like protein.
     
  0.608
CCH79_00003696
RING-type domain-containing protein.
    
 0.596
CCH79_00017800
Uncharacterized protein.
   
 
  0.575
ENSGAFP00000021594
Cullin-associated and neddylation-dissociated 2 (putative).
   
 
  0.575
ENSGAFP00000022428
NEDD8 ubiquitin like modifier, like.
    
  0.573
CCH79_00001358
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.567
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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