STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00010684Endo/exonuclease/phosphatase domain-containing protein. (296 aa)    
Predicted Functional Partners:
CCH79_00011751
HDAC_interact domain-containing protein.
    
 0.706
CCH79_00006252
HDAC_interact domain-containing protein.
    
 0.706
CCH79_00007146
HDAC_interact domain-containing protein.
    
 0.706
CCH79_00019941
CCHC NOA-type domain-containing protein.
   
 0.666
CCH79_00016049
CCHC NOA-type domain-containing protein.
   
 0.666
CCH79_00015492
Robl_LC7 domain-containing protein.
    
 0.654
CCH79_00007015
Uncharacterized protein.
    
 0.647
CCH79_00017422
Uncharacterized protein.
    
 0.647
ENSGAFP00000007036
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.647
CCH79_00001591
Protein kinase domain-containing protein.
    
 0.647
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.