STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001194annotation not available (424 aa)    
Predicted Functional Partners:
CCH79_00004429
Uncharacterized protein.
   
 0.997
ENSGAFP00000001282
annotation not available
 
     0.946
ENSGAFP00000001462
annotation not available
 
    
0.920
ENSGAFP00000003747
annotation not available
 
     0.913
CCH79_00004698
WD_REPEATS_REGION domain-containing protein.
    
 0.753
IFT122
WD_REPEATS_REGION domain-containing protein.
   
 0.746
ENSGAFP00000030585
WD repeat domain 19.
    
 0.739
CCH79_00015610
WD_REPEATS_REGION domain-containing protein.
    
 0.735
ENSGAFP00000003769
annotation not available
 
     0.695
CCH79_00014197
Uncharacterized protein.
    
 0.641
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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