Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001344DUF1624 domain-containing protein. (630 aa)    
Predicted Functional Partners:
CCH79_00016726
Uncharacterized protein.
     
 0.970
CCH79_00012694
Uncharacterized protein.
     
 0.957
CCH79_00012393
Uncharacterized protein.
  
  
 
0.904
CCH79_00005800
Uncharacterized protein.
      
 0.576
CCH79_00001253
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
  
 0.572
CCH79_00019382
Sulfatase domain-containing protein.
   
  
 0.572
CCH79_00016761
Sulfatase domain-containing protein.
      
 0.568
CCH79_00005272
Glyco_transf_64 domain-containing protein.
   
  
 0.566
SPIDR
Uncharacterized protein.
      
 0.558
CCH79_00005389
DNA helicase; Belongs to the MCM family.
      
 0.552
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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