STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020123Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
CCH79_00007109
AAA domain-containing protein.
      
 0.720
CCH79_00020124
F-box domain-containing protein.
      
 0.716
ENSGAFP00000018619
Protein phosphatase 3, regulatory subunit B, alpha a.
      
 0.688
CCH79_00003685
WD_REPEATS_REGION domain-containing protein.
      
 0.687
CCH79_00015813
Uncharacterized protein.
      
 0.641
ENSGAFP00000001255
annotation not available
      
 0.633
ENSGAFP00000018607
WD repeat domain 92.
      
 0.606
CCH79_00019110
Uncharacterized protein.
      
 0.513
ENSGAFP00000020742
LMBR1 domain containing 2a.
      
 0.513
CCH79_00020895
AB hydrolase-1 domain-containing protein.
      
 0.488
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (20%) [HD]