STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017507Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
CCH79_00003172
GTP_cyclohydroI domain-containing protein.
    
 0.807
CCH79_00006312
GTP_cyclohydroI domain-containing protein.
    
 0.807
CCH79_00003397
Uncharacterized protein.
    
 0.806
CCH79_00018938
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.798
CCH79_00006334
HD domain-containing protein.
  
 
  0.753
CCH79_00004690
Elp3 domain-containing protein.
    
  0.744
CCH79_00012843
Aminotran_1_2 domain-containing protein.
  
    0.736
PARP8
poly(ADP-ribose) polymerase family member 8.
   
 0.707
CCH79_00006239
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.707
CCH79_00010826
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.707
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.