Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH79_00017507Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
CCH79_00008808
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
   0.940
ENSGAFP00000012890
Transforming, acidic coiled-coil containing protein 1.
    
   0.793
CCH79_00006962
TACC_C domain-containing protein.
    
   0.793
ENSGAFP00000012373
annotation not available
   
   0.774
CCH79_00003880
Uncharacterized protein.
    
   0.773
CCH79_00004637
Peptidase_M28 domain-containing protein.
    
   0.773
CCH79_00009924
VPS37 C-terminal domain-containing protein.
    
   0.771
CCH79_00004902
PCI domain-containing protein.
   
 
 0.766
CCH79_00018938
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.755
CCH79_00013320
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
 0.754
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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