Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017793Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
CCH79_00013943
Fibronectin type-III domain-containing protein.
     
 0.763
ENSGAFP00000006843
Interleukin 10.
   
  
 0.679
CCH79_00017796
Uncharacterized protein.
  
   
 0.665
ENSGAFP00000017940
annotation not available
      
 0.530
ENSGAFP00000000448
annotation not available
      
 0.527
ENSGAFP00000000333
annotation not available
  
     0.524
CCH79_00001926
Uncharacterized protein.
  
     0.462
CCH79_00012295
Uncharacterized protein.
  
     0.460
CCH79_00017291
Signal transducer and activator of transcription.
     
 0.451
ENSGAFP00000005151
annotation not available
  
     0.449
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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