Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00010687SH3 domain-containing protein. (655 aa)    
Predicted Functional Partners:
CCH79_00013211
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.829
CCH79_00017139
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.829
ENSGAFP00000009889
Small nuclear ribonucleoprotein polypeptide E.
      
 0.675
CCH79_00013117
Uncharacterized protein.
      
 0.628
CCH79_00008141
Uncharacterized protein.
      
 0.624
CCH79_00010443
Cog4 domain-containing protein.
      
 0.610
CCH79_00004196
Uncharacterized protein.
      
 0.596
ENSGAFP00000032428
Usher syndrome 1C.
   
 
 0.583
CCH79_00013090
CPSF_A domain-containing protein.
      
 0.535
CCH79_00019931
Uncharacterized protein.
      
 0.519
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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