STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017508Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
ENSGAFP00000013828
annotation not available
    
 0.705
CCH79_00005408
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.606
ENSGAFP00000011052
Collagen, type IX, alpha 1b.
      
 0.592
CCH79_00001651
Uncharacterized protein.
      
 0.544
CCH79_00000343
Uncharacterized protein.
   
 0.532
ENSGAFP00000019606
Ripply transcriptional repressor 2.
   
  
 0.529
CCH79_00016106
LEM domain-containing protein.
    
 
 0.526
CCH79_00003319
Homeobox domain-containing protein.
    
 
 0.524
CCH79_00020651
TGF_BETA_2 domain-containing protein.
     
 0.507
CCH79_00011968
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.499
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.