Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSGAFP00000001290Solute carrier family 12 member 5a. (1154 aa)    
Predicted Functional Partners:
ENSGAFP00000009453
Potassium voltage-gated channel, Shal-related subfamily, member 3.
      
 0.600
CCH79_00010200
BTB domain-containing protein; Belongs to the potassium channel family.
      
 0.600
CCH79_00006548
DHQ_synthase domain-containing protein.
   
 0.548
CCH79_00005985
YrdC-like domain-containing protein.
   
 0.548
CCH79_00018419
Uncharacterized protein.
      
 0.533
ENSGAFP00000007357
Oxidative stress responsive kinase 1b.
    
 
 0.471
ENSGAFP00000008754
Oxidative stress responsive kinase 1a.
    
 
 0.471
CCH79_00002812
Protein kinase domain-containing protein.
    
 
 0.471
CCH79_00018358
Galectin.
    
   0.454
CCH79_00000418
Uncharacterized protein.
   
 0.447
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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