Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00014505Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.549
CCH79_00020274
Uncharacterized protein.
   
 0.541
CCH79_00007692
Ipi1_N domain-containing protein.
    
 0.532
CCH79_00019741
Uncharacterized protein.
   
  0.450
CCH79_00001872
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 0.436
ENSGAFP00000010650
Guanine nucleotide binding protein-like 3 (nucleolar).
   
  0.435
ENSGAFP00000016493
Guanine nucleotide binding protein-like 3 (nucleolar)-like.
   
  0.435
CCH79_00002516
Ribosomal_L2_C domain-containing protein.
    
  0.435
CCH79_00012875
Uncharacterized protein.
    
  0.434
CCH79_00006530
Uncharacterized protein.
    
  0.434
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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