Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSGAFP00000001308CAP-GLY domain containing linker protein 1a. (2203 aa)    
Predicted Functional Partners:
CCH79_00001214
Uncharacterized protein.
     
 
0.900
CCH79_00017091
Uncharacterized protein.
    
 0.887
ENSGAFP00000016939
annotation not available
    
 0.841
ENSGAFP00000022952
Cytoplasmic linker associated protein 2.
    
 0.841
CCH79_00016061
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.825
CCH79_00013098
Uncharacterized protein.
   
 0.823
CCH79_00002369
Uncharacterized protein.
   
 0.802
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
   
 0.802
CCH79_00007833
Dynactin domain-containing protein.
   
 
 0.778
ENSGAFP00000027342
Dynactin 1a.
   
 
 0.778
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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