Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
CCH79_00015363AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. (1124 aa)    
Predicted Functional Partners:
CCH79_00019944
B2-adapt-app_C domain-containing protein.
   
0.999
CCH79_00007738
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.999
CCH79_00016169
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.997
CCH79_00016765
Uncharacterized protein.
   
 
 0.985
CCH79_00012460
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.966
CCH79_00009465
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.966
CCH79_00009619
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.966
CCH79_00009024
Uncharacterized protein.
   
 0.937
CCH79_00005153
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.917
CCH79_00017607
Uncharacterized protein.
   
 0.917
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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