STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001351annotation not available (270 aa)    
Predicted Functional Partners:
CCH79_00004429
Uncharacterized protein.
   
 0.900
ENSGAFP00000021595
Sodium channel, voltage-gated, type I, beta a.
    
 0.853
CCH79_00017878
Ig-like domain-containing protein.
    
 0.853
CCH79_00003676
Ig-like domain-containing protein.
   
 0.765
CCH79_00019317
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
 
  0.746
CCH79_00003677
Ig-like domain-containing protein.
    
 0.707
ENSGAFP00000001375
annotation not available
 
     0.704
IFT122
WD_REPEATS_REGION domain-containing protein.
   
 0.675
CCH79_00004698
WD_REPEATS_REGION domain-containing protein.
    
 0.665
CCH79_00015610
WD_REPEATS_REGION domain-containing protein.
   
 0.640
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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