STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003627VASt domain-containing protein. (774 aa)    
Predicted Functional Partners:
ENSGAFP00000001316
annotation not available
 
      0.868
CCH79_00005430
SSD domain-containing protein.
      
 0.595
CCH79_00003676
Ig-like domain-containing protein.
    
 0.576
CCH79_00002049
Ig-like domain-containing protein.
    
 0.576
CCH79_00003575
Ig-like domain-containing protein.
    
 0.576
CCH79_00003677
Ig-like domain-containing protein.
   
 0.569
CCH79_00002048
Ig-like domain-containing protein.
   
 0.569
CCH79_00004209
VASt domain-containing protein.
  
 
  
0.502
CCH79_00018562
Ig-like domain-containing protein.
 
   
  0.502
CCH79_00001157
GRAM domain-containing protein.
    
  
0.499
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.