Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001374annotation not available (218 aa)    
Predicted Functional Partners:
CCH79_00001347
DDHD domain-containing protein.
 
      0.900
ENSGAFP00000021548
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.825
CCH79_00001195
WD_REPEATS_REGION domain-containing protein.
   
 0.767
CCH79_00003094
WD_REPEATS_REGION domain-containing protein.
   
 0.767
ENSGAFP00000017172
annotation not available
   
 0.685
CCH79_00007764
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.685
CCH79_00012756
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.685
CCH79_00002484
Uncharacterized protein.
   
 
 0.674
CCH79_00005593
Uncharacterized protein.
   
 
 0.674
CCH79_00014561
ANK_REP_REGION domain-containing protein.
    
 0.636
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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