Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003468Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
CCH79_00013211
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.636
CCH79_00017139
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.636
CCH79_00018759
Uncharacterized protein.
    
 0.612
CCH79_00018077
Uncharacterized protein.
    
 0.610
CCH79_00002990
Uncharacterized protein.
    
 0.600
CCH79_00000617
Uncharacterized protein.
    
 0.585
CCH79_00009896
IFT81_CH domain-containing protein.
    
 0.571
CCH79_00003920
Uncharacterized protein.
    
 0.566
CCH79_00016476
ABC_transp_aux domain-containing protein.
    
 0.556
ENSGAFP00000023086
Protein kinase C, zeta.
    
 0.541
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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