Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019622CSD_1 domain-containing protein. (158 aa)    
Predicted Functional Partners:
CCH79_00014927
Uncharacterized protein.
  
   0.859
CCH79_00002268
Uncharacterized protein.
    
   0.778
ENSGAFP00000021610
COP9 constitutive photomorphogenic homolog subunit 7A.
      
 0.721
CCH79_00008199
LITAF domain-containing protein.
      
 0.721
CCH79_00020613
Amidohydro-rel domain-containing protein.
     
 0.717
CCH79_00003335
Uncharacterized protein.
     
 0.708
CCH79_00014921
Sm domain-containing protein.
   
  0.703
ENSGAFP00000000582
Solute carrier family 38 member 7.
   
  
 0.695
CCH79_00019938
Small nuclear ribonucleoprotein G.
   
  0.691
CCH79_00015717
Uncharacterized protein.
      
 0.687
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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