Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSGAFP00000001404DEXH (Asp-Glu-X-His) box polypeptide 58. (675 aa)    
Predicted Functional Partners:
CCH79_00002824
Uncharacterized protein.
  
0.996
CCH79_00014979
USP domain-containing protein.
   
 
 0.937
CCH79_00015521
ERCC4 domain-containing protein.
    
 0.932
CCH79_00015153
Elp3 domain-containing protein.
   
  
 0.927
ENSGAFP00000021153
Interferon regulatory factor 3.
   
 0.900
CCH79_00010720
Uncharacterized protein.
  
 
 0.896
CCH79_00006955
Uncharacterized protein.
    
 0.895
ENSGAFP00000021072
Ribosomal protein S27a.
   
 0.873
CCH79_00001522
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.872
CCH79_00001420
RING-type domain-containing protein.
    
 0.870
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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