Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017112Uncharacterized protein. (701 aa)    
Predicted Functional Partners:
CCH79_00015744
Serine/threonine-protein phosphatase.
   
 0.896
CCH79_00002478
Serine/threonine-protein phosphatase.
    
 0.826
CCH79_00005989
Serine/threonine-protein phosphatase.
    
 0.826
CCH79_00016202
Serine/threonine-protein phosphatase.
    
 0.826
CCH79_00004390
S4 RNA-binding domain-containing protein.
      
 0.780
CCH79_00006845
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
    
 
 0.778
CCH79_00005769
Fibrinogen C-terminal domain-containing protein.
    
   0.777
CCH79_00012012
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.773
CCH79_00003452
Uncharacterized protein.
      
 0.769
CCH79_00003110
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.751
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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