STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00006473G-patch domain-containing protein. (362 aa)    
Predicted Functional Partners:
CCH79_00018552
Uncharacterized protein.
    
 0.996
CCH79_00010400
Uncharacterized protein.
   
 0.988
CCH79_00001878
Uncharacterized protein.
   
 
 0.965
CCH79_00003782
MPN domain-containing protein.
    
 
 0.936
CCH79_00001188
PPIase cyclophilin-type domain-containing protein.
    
 0.929
ENSGAFP00000031396
CWC22 spliceosome associated protein homolog.
    
 0.915
CCH79_00003358
Uncharacterized protein.
   
   0.912
CCH79_00008117
Uncharacterized protein.
   
  0.907
CCH79_00013233
U-box domain-containing protein.
    
 0.900
CCH79_00013090
CPSF_A domain-containing protein.
   
   0.884
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.