ENSGAFP00000001425 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000001425

annotation not available (351 aa)

Predicted Functional Partners:

CCH79_00020215

0.957

ENSGAFP00000005671

0.732

CCH79_00001180

0.698

CCH79_00005496

0.694

CCH79_00019585

0.655

ENSGAFP00000003792

0.655

ENSGAFP00000020828

0.655

GNAS

0.655

CCH79_00009673

0.655

CCH79_00008173

0.652

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00001180	CCH79_00008173	ENSGAFP00000004496	ENSGAFP00000023447	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	0.700
CCH79_00001180	CCH79_00009673	ENSGAFP00000004496	ENSGAFP00000031089	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.664
CCH79_00001180	CCH79_00019585	ENSGAFP00000004496	ENSGAFP00000003735	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.664
CCH79_00001180	ENSGAFP00000001425	ENSGAFP00000004496	ENSGAFP00000001425	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.698
CCH79_00001180	ENSGAFP00000003792	ENSGAFP00000004496	ENSGAFP00000003792	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.664
CCH79_00001180	ENSGAFP00000005671	ENSGAFP00000004496	ENSGAFP00000005671	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Lysophosphatidic acid receptor 1.	0.755
CCH79_00001180	ENSGAFP00000020828	ENSGAFP00000004496	ENSGAFP00000020828	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.664
CCH79_00001180	GNAS	ENSGAFP00000004496	ENSGAFP00000028217	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.664
CCH79_00005496	CCH79_00008173	ENSGAFP00000024417	ENSGAFP00000023447	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	0.700
CCH79_00005496	CCH79_00009673	ENSGAFP00000024417	ENSGAFP00000031089	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.664
CCH79_00005496	CCH79_00019585	ENSGAFP00000024417	ENSGAFP00000003735	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.664
CCH79_00005496	ENSGAFP00000001425	ENSGAFP00000024417	ENSGAFP00000001425	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.694
CCH79_00005496	ENSGAFP00000003792	ENSGAFP00000024417	ENSGAFP00000003792	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.664
CCH79_00005496	ENSGAFP00000005671	ENSGAFP00000024417	ENSGAFP00000005671	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Lysophosphatidic acid receptor 1.	0.722
CCH79_00005496	ENSGAFP00000020828	ENSGAFP00000024417	ENSGAFP00000020828	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.664
CCH79_00005496	GNAS	ENSGAFP00000024417	ENSGAFP00000028217	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.664
CCH79_00008173	CCH79_00001180	ENSGAFP00000023447	ENSGAFP00000004496	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	0.700
CCH79_00008173	CCH79_00005496	ENSGAFP00000023447	ENSGAFP00000024417	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.700
CCH79_00008173	ENSGAFP00000001425	ENSGAFP00000023447	ENSGAFP00000001425	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.652
CCH79_00008173	ENSGAFP00000005671	ENSGAFP00000023447	ENSGAFP00000005671	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.	Lysophosphatidic acid receptor 1.	0.711