CCH79_00000486 protein (Gambusia affinis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene fusions

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[Homology]

Score

CCH79_00000486

Uncharacterized protein. (453 aa)

Predicted Functional Partners:

CCH79_00011872

0.932

ENSGAFP00000026286

0.932

CCH79_00012000

0.932

CCH79_00014615

0.932

CCH79_00006965

0.930

CCH79_00000401

0.915

CCH79_00016835

0.912

CCH79_00009463

0.889

ENSGAFP00000012990

0.886

CCH79_00006771

0.878

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00000401	CCH79_00000486	ENSGAFP00000018291	ENSGAFP00000001428	Uncharacterized protein.	Uncharacterized protein.	0.915
CCH79_00000401	CCH79_00006771	ENSGAFP00000018291	ENSGAFP00000013535	Uncharacterized protein.	Uncharacterized protein.	0.774
CCH79_00000401	CCH79_00006965	ENSGAFP00000018291	ENSGAFP00000018093	Uncharacterized protein.	Uncharacterized protein.	0.774
CCH79_00000401	CCH79_00009463	ENSGAFP00000018291	ENSGAFP00000013225	Uncharacterized protein.	Uncharacterized protein.	0.774
CCH79_00000401	CCH79_00011872	ENSGAFP00000018291	ENSGAFP00000014430	Uncharacterized protein.	NYD-SP28 domain-containing protein.	0.781
CCH79_00000401	CCH79_00012000	ENSGAFP00000018291	ENSGAFP00000029339	Uncharacterized protein.	Uncharacterized protein.	0.774
CCH79_00000401	CCH79_00014615	ENSGAFP00000018291	ENSGAFP00000029909	Uncharacterized protein.	Uncharacterized protein.	0.774
CCH79_00000401	CCH79_00016835	ENSGAFP00000018291	ENSGAFP00000006584	Uncharacterized protein.	Uncharacterized protein.	0.715
CCH79_00000401	ENSGAFP00000012990	ENSGAFP00000018291	ENSGAFP00000012990	Uncharacterized protein.	Dynein, axonemal, light intermediate chain 1.	0.883
CCH79_00000401	ENSGAFP00000026286	ENSGAFP00000018291	ENSGAFP00000026286	Uncharacterized protein.	annotation not available	0.774
CCH79_00000486	CCH79_00000401	ENSGAFP00000001428	ENSGAFP00000018291	Uncharacterized protein.	Uncharacterized protein.	0.915
CCH79_00000486	CCH79_00006771	ENSGAFP00000001428	ENSGAFP00000013535	Uncharacterized protein.	Uncharacterized protein.	0.878
CCH79_00000486	CCH79_00006965	ENSGAFP00000001428	ENSGAFP00000018093	Uncharacterized protein.	Uncharacterized protein.	0.930
CCH79_00000486	CCH79_00009463	ENSGAFP00000001428	ENSGAFP00000013225	Uncharacterized protein.	Uncharacterized protein.	0.889
CCH79_00000486	CCH79_00011872	ENSGAFP00000001428	ENSGAFP00000014430	Uncharacterized protein.	NYD-SP28 domain-containing protein.	0.932
CCH79_00000486	CCH79_00012000	ENSGAFP00000001428	ENSGAFP00000029339	Uncharacterized protein.	Uncharacterized protein.	0.932
CCH79_00000486	CCH79_00014615	ENSGAFP00000001428	ENSGAFP00000029909	Uncharacterized protein.	Uncharacterized protein.	0.932
CCH79_00000486	CCH79_00016835	ENSGAFP00000001428	ENSGAFP00000006584	Uncharacterized protein.	Uncharacterized protein.	0.912
CCH79_00000486	ENSGAFP00000012990	ENSGAFP00000001428	ENSGAFP00000012990	Uncharacterized protein.	Dynein, axonemal, light intermediate chain 1.	0.886
CCH79_00000486	ENSGAFP00000026286	ENSGAFP00000001428	ENSGAFP00000026286	Uncharacterized protein.	annotation not available	0.932