STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005811Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
CCH79_00019938
Small nuclear ribonucleoprotein G.
    
   0.647
ENSGAFP00000020586
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.452
ENSGAFP00000002632
annotation not available
    
   0.438
CCH79_00010535
Proteasome subunit beta.
    
   0.438
CCH79_00011926
ENT domain-containing protein.
    
   0.438
ENSGAFP00000016872
Sodium channel, voltage-gated, type III, beta.
      
 0.424
ENSGAFP00000028408
WAP four-disulfide core domain 2.
      
 0.418
ENSGAFP00000016457
Dual adaptor of phosphotyrosine and 3-phosphoinositides.
      
 0.416
CCH79_00004474
Uncharacterized protein.
      
 0.414
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.