Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008271Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
CCH79_00006566
J domain-containing protein.
    
   0.832
CCH79_00004646
Rap-GAP domain-containing protein.
    
 
 0.827
ENSGAFP00000029104
Ral GTPase activating protein, alpha subunit 1 (catalytic).
    
 
 0.827
CCH79_00017974
Rap-GAP domain-containing protein.
    
   0.784
ENSGAFP00000030124
annotation not available
    
   0.784
ENSGAFP00000011273
annotation not available
    
   0.742
CCH79_00015393
Uncharacterized protein.
    
   0.739
CCH79_00010445
GFO_IDH_MocA domain-containing protein.
    
   0.739
ENSGAFP00000015073
PDZ and LIM domain 2 (mystique).
      
 0.564
CCH79_00001397
TPR_REGION domain-containing protein.
      
 0.551
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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