Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005812Bromo domain-containing protein. (79 aa)    
Predicted Functional Partners:
CCH79_00007116
Uncharacterized protein.
    
 0.991
CCH79_00020269
Uncharacterized protein.
    
 0.988
CCH79_00020192
Inhibitor of growth protein.
    
 0.988
CCH79_00017827
Uncharacterized protein.
    
 0.977
CCH79_00020149
Uncharacterized protein.
    
 0.977
CCH79_00008743
YL1_C domain-containing protein.
    
 0.976
CCH79_00021056
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.971
CCH79_00002203
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.969
ENSGAFP00000032225
RuvB-like AAA ATPase 1.
    
 0.969
CCH79_00004880
MRG domain-containing protein.
    
 0.953
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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