CCH79_00009130 protein (Gambusia affinis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CCH79_00009130

Uncharacterized protein. (462 aa)

Predicted Functional Partners:

CCH79_00008267

0.993

CCH79_00017113

0.993

CCH79_00003061

0.993

CCH79_00011469

0.993

CCH79_00008830

0.993

CCH79_00013594

0.971

CCH79_00011923

0.971

CCH79_00020653

0.955

CCH79_00003911

0.955

ENSGAFP00000006885

0.941

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00003061	CCH79_00003911	ENSGAFP00000005338	ENSGAFP00000018906	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003061	CCH79_00009130	ENSGAFP00000005338	ENSGAFP00000001494	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003061	CCH79_00011923	ENSGAFP00000005338	ENSGAFP00000015830	Uncharacterized protein.	Uncharacterized protein.	0.894
CCH79_00003061	CCH79_00013594	ENSGAFP00000005338	ENSGAFP00000008366	Uncharacterized protein.	Uncharacterized protein.	0.649
CCH79_00003061	CCH79_00020653	ENSGAFP00000005338	ENSGAFP00000006695	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003911	CCH79_00003061	ENSGAFP00000018906	ENSGAFP00000005338	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003911	CCH79_00008267	ENSGAFP00000018906	ENSGAFP00000001258	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003911	CCH79_00008830	ENSGAFP00000018906	ENSGAFP00000017183	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003911	CCH79_00009130	ENSGAFP00000018906	ENSGAFP00000001494	Uncharacterized protein.	Uncharacterized protein.	0.955
CCH79_00003911	CCH79_00011469	ENSGAFP00000018906	ENSGAFP00000011602	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003911	CCH79_00011923	ENSGAFP00000018906	ENSGAFP00000015830	Uncharacterized protein.	Uncharacterized protein.	0.987
CCH79_00003911	CCH79_00013594	ENSGAFP00000018906	ENSGAFP00000008366	Uncharacterized protein.	Uncharacterized protein.	0.979
CCH79_00003911	CCH79_00017113	ENSGAFP00000018906	ENSGAFP00000001465	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00003911	CCH79_00020653	ENSGAFP00000018906	ENSGAFP00000006695	Uncharacterized protein.	Uncharacterized protein.	0.953
CCH79_00003911	ENSGAFP00000006885	ENSGAFP00000018906	ENSGAFP00000006885	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.941
CCH79_00008267	CCH79_00003911	ENSGAFP00000001258	ENSGAFP00000018906	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00008267	CCH79_00009130	ENSGAFP00000001258	ENSGAFP00000001494	Uncharacterized protein.	Uncharacterized protein.	0.993
CCH79_00008267	CCH79_00011923	ENSGAFP00000001258	ENSGAFP00000015830	Uncharacterized protein.	Uncharacterized protein.	0.894
CCH79_00008267	CCH79_00013594	ENSGAFP00000001258	ENSGAFP00000008366	Uncharacterized protein.	Uncharacterized protein.	0.649
CCH79_00008267	CCH79_00020653	ENSGAFP00000001258	ENSGAFP00000006695	Uncharacterized protein.	Uncharacterized protein.	0.993