Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00015370Uncharacterized protein. (1172 aa)    
Predicted Functional Partners:
CCH79_00019103
Uncharacterized protein.
    
 
 0.724
CCH79_00010998
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
     
 0.704
CCH79_00015369
TRASH domain-containing protein.
      
 0.681
ENSGAFP00000010710
Nerve growth factor a (beta polypeptide).
    
 
 0.681
CCH79_00017622
Angiomotin_C domain-containing protein.
     
 0.601
CCH79_00004621
BTB domain-containing protein.
      
 0.561
CCH79_00007293
HMG box domain-containing protein.
    
 0.552
CCH79_00007291
Dilute domain-containing protein.
      
 0.535
LRFN2
Uncharacterized protein.
    
 0.491
CCH79_00004842
DUF4210 domain-containing protein.
      
 0.488
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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