STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017540Uncharacterized protein. (3305 aa)    
Predicted Functional Partners:
ENSGAFP00000009967
Amnion associated transmembrane protein.
   
 0.939
CCH79_00009096
DUF4430 domain-containing protein.
    
 0.836
ENSGAFP00000006400
annotation not available
    
 0.708
ENSGAFP00000006438
annotation not available
    
 0.708
ENSGAFP00000013015
Macrophage stimulating 1 receptor b.
    
 0.708
ENSGAFP00000015988
Macrophage stimulating 1 receptor a.
    
 0.708
ENSGAFP00000003339
Low density lipoprotein receptor-related protein 2a.
   
 0.695
ENSGAFP00000005292
Cathepsin Z.
    
 
 0.616
CCH79_00006352
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.598
CCH79_00007891
Uncharacterized protein.
     
 0.579
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.