STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00009131PDZ domain-containing protein. (201 aa)    
Predicted Functional Partners:
CCH79_00010534
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.998
CCH79_00017588
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.998
CCH79_00017514
AAA domain-containing protein.
   
 0.987
CCH79_00018565
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.986
CCH79_00015002
RPN1_RPN2_N domain-containing protein.
    
 0.981
ENSGAFP00000023963
Proteasome 26S subunit, non-ATPase 12.
    
 0.970
CCH79_00014362
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.956
CCH79_00004963
MPN domain-containing protein.
  
 0.945
CCH79_00012188
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 0.943
CCH79_00005874
ANK_REP_REGION domain-containing protein.
  
 0.942
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.