Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000647Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
CCH79_00017514
AAA domain-containing protein.
   
   0.880
CCH79_00005874
ANK_REP_REGION domain-containing protein.
     
 0.707
CCH79_00000566
WD_REPEATS_REGION domain-containing protein.
      
 0.698
CCH79_00016640
Guanylate kinase-like domain-containing protein.
      
 0.687
CCH79_00013115
WD_REPEATS_REGION domain-containing protein.
     
 0.675
CCH79_00018765
Tcp10_C domain-containing protein.
     
 0.662
ENSGAFP00000028692
Centrosomal protein 135.
     
 0.662
CCH79_00013098
Uncharacterized protein.
     
 0.656
CCH79_00005287
Serine/threonine-protein kinase PLK.
     
  0.647
CCH79_00008937
Serine/threonine-protein kinase PLK.
     
  0.647
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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