Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017116Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
CCH79_00008444
Uncharacterized protein.
 
      0.761
ENSGAFP00000019834
Potassium voltage-gated channel, subfamily F, member 1a.
     
 0.599
ENSGAFP00000018457
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
    
 0.562
CCH79_00020095
Aldo_ket_red domain-containing protein.
    
 0.562
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.535
KCNAB3
Aldo_ket_red domain-containing protein.
    
 0.535
CCH79_00005250
Aldo_ket_red domain-containing protein.
    
 0.535
CCH79_00000337
Uncharacterized protein.
    
 0.535
CCH79_00019571
Uncharacterized protein.
    
 0.535
CCH79_00006386
Uncharacterized protein; Belongs to the potassium channel family.
     
 0.531
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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