Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005815Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
ENSGAFP00000030440
Ly1 antibody reactive homolog (mouse).
   
 
 0.777
CCH79_00018053
WD_REPEATS_REGION domain-containing protein.
   
 0.757
CCH79_00004609
WD_REPEATS_REGION domain-containing protein.
   
 0.757
CCH79_00001264
B30.2/SPRY domain-containing protein.
    
 0.737
ENSGAFP00000002795
Retinoblastoma binding protein 5.
   
 0.735
CCH79_00013208
Uncharacterized protein.
  
 0.695
CCH79_00002107
Uncharacterized protein.
    
 
 0.658
CCH79_00005576
Uncharacterized protein.
    
 
 0.658
CCH79_00006942
Uncharacterized protein.
   
 
 0.633
CCH79_00018763
Uncharacterized protein.
    
 0.632
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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