Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016273DM domain-containing protein. (467 aa)    
Predicted Functional Partners:
CCH79_00015623
WD_REPEATS_REGION domain-containing protein.
    
 0.741
CCH79_00002268
Uncharacterized protein.
    
 0.733
CCH79_00017367
DEP domain-containing protein.
   
 0.702
CCH79_00016274
DM domain-containing protein.
   
  
 0.698
ENSGAFP00000008942
WD repeat domain 59.
    
 0.697
ENSGAFP00000017961
NPR2 like, GATOR1 complex subunit.
    
 0.689
CCH79_00003033
Uncharacterized protein.
      
 0.687
CCH79_00010503
Mitochondrial inner membrane protease subunit.
    
 0.607
ENSGAFP00000011418
X-ray repair complementing defective repair in Chinese hamster cells 4.
    
 0.607
CCH79_00014927
Uncharacterized protein.
    
 0.607
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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