Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017541Uncharacterized protein. (659 aa)    
Predicted Functional Partners:
CCH79_00009710
Uncharacterized protein.
    
 0.998
CCH79_00019032
Uncharacterized protein.
   
 0.975
CCH79_00019924
ABC transmembrane type-1 domain-containing protein.
  
0.934
CCH79_00017580
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
    
   0.932
CCH79_00019925
ABC transporter domain-containing protein.
   
 0.924
CCH79_00014380
Uncharacterized protein.
   
 0.924
CCH79_00018907
Peroxisomal membrane protein PEX16.
     
 0.900
CCH79_00004295
RING-type domain-containing protein.
    
 0.896
CCH79_00020751
CS domain-containing protein.
    
   0.880
ENSGAFP00000028436
Peroxisomal biogenesis factor 14.
   
 0.873
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (26%) [HD]