STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012037Protein kinase domain-containing protein. (866 aa)    
Predicted Functional Partners:
CCH79_00008974
DUF5595 domain-containing protein.
   
 
 0.994
CCH79_00018746
Uncharacterized protein.
   
 
 0.991
CCH79_00013911
Uncharacterized protein.
    
 0.991
ENSGAFP00000011097
UF2 component of NDC80 kinetochore complex.
   
 
 0.984
CCH79_00017707
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.978
ENSGAFP00000017340
annotation not available
   
 
 0.961
ENSGAFP00000020884
annotation not available
   
 
 0.961
CCH79_00005303
WD_REPEATS_REGION domain-containing protein.
   
 
 0.953
CCH79_00016743
Uncharacterized protein.
   
  
 0.949
CCH79_00016061
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.946
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.