Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012038Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
CCH79_00004803
Uncharacterized protein.
    
   0.859
CCH79_00013508
Uncharacterized protein.
    
   0.859
CCH79_00002411
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
    
   0.843
ENSGAFP00000000077
annotation not available
    
 
 0.742
CCH79_00000393
Uncharacterized protein; May play a role in anchoring the cytoskeleton to the plasma membrane.
    
 
 0.742
CCH79_00013410
ZZ-type domain-containing protein.
    
 
 0.742
CCH79_00013413
Calponin-homology (CH) domain-containing protein; May play a role in anchoring the cytoskeleton to the plasma membrane.
    
 
 0.742
CCH79_00005675
Uncharacterized protein.
    
 
 0.742
CCH79_00004118
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.717
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
      
 0.716
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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