Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00015374Uncharacterized protein. (1033 aa)    
Predicted Functional Partners:
ENSGAFP00000025748
Cingulin-like 1.
  
  
 
0.907
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
  0.900
CCH79_00005071
Uncharacterized protein; Belongs to the MAGUK family.
     
  0.900
ENSGAFP00000021680
annotation not available
     
  0.900
ENSGAFP00000023775
annotation not available
   
 0.575
CCH79_00007442
Malate dehydrogenase.
    
 0.532
CCH79_00019618
Uncharacterized protein.
    
  0.528
CCH79_00013098
Uncharacterized protein.
    
 0.526
CCH79_00015139
Uncharacterized protein.
    
 0.484
ENSGAFP00000014434
Polo-like kinase 4 (Drosophila).
    
 0.468
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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