STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016424Uncharacterized protein. (1699 aa)    
Predicted Functional Partners:
LAMA2
Uncharacterized protein.
   
0.928
CCH79_00009749
Integrin beta; Belongs to the integrin beta chain family.
    
 0.920
ITGA7
Integrin subunit alpha 7.
    
 0.919
CCH79_00001030
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.918
ENSGAFP00000025481
Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2.
    
 0.918
CCH79_00016403
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.917
CCH79_00008484
Integrin beta.
    
 0.916
CCH79_00006442
Uncharacterized protein; Belongs to the integrin alpha chain family.
    
 0.916
CCH79_00001520
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.915
CCH79_00002766
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.903
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.