ENSGAFP00000001693 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000001693

annotation not available (77 aa)

Predicted Functional Partners:

CCH79_00011836

0.741

ENSGAFP00000022498

0.623

MCM7

0.620

CCH79_00004118

0.620

GRIN3A

0.610

CCH79_00007747

0.552

ENSGAFP00000015299

0.537

ENSGAFP00000007606

0.536

CCH79_00009019

0.536

RIMS2

0.534

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00004118	ENSGAFP00000001693	ENSGAFP00000004920	ENSGAFP00000001693	G_PROTEIN_RECEP_F1_2 domain-containing protein.	annotation not available	0.620
CCH79_00004118	ENSGAFP00000007606	ENSGAFP00000004920	ENSGAFP00000007606	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Sprouty homolog 4 (Drosophila).	0.923
CCH79_00004118	ENSGAFP00000015299	ENSGAFP00000004920	ENSGAFP00000015299	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Carbonic anhydrase XVI b.	0.730
CCH79_00004118	ENSGAFP00000022498	ENSGAFP00000004920	ENSGAFP00000022498	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Lumican.	0.907
CCH79_00004118	GRIN3A	ENSGAFP00000004920	ENSGAFP00000006706	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.924
CCH79_00004118	MCM7	ENSGAFP00000004920	ENSGAFP00000004478	G_PROTEIN_RECEP_F1_2 domain-containing protein.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.857
CCH79_00007747	ENSGAFP00000001693	ENSGAFP00000016747	ENSGAFP00000001693	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	annotation not available	0.552
CCH79_00009019	ENSGAFP00000001693	ENSGAFP00000025161	ENSGAFP00000001693	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	annotation not available	0.536
CCH79_00011836	ENSGAFP00000001693	ENSGAFP00000010427	ENSGAFP00000001693	Uncharacterized protein.	annotation not available	0.741
ENSGAFP00000001693	CCH79_00004118	ENSGAFP00000001693	ENSGAFP00000004920	annotation not available	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.620
ENSGAFP00000001693	CCH79_00007747	ENSGAFP00000001693	ENSGAFP00000016747	annotation not available	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.552
ENSGAFP00000001693	CCH79_00009019	ENSGAFP00000001693	ENSGAFP00000025161	annotation not available	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.536
ENSGAFP00000001693	CCH79_00011836	ENSGAFP00000001693	ENSGAFP00000010427	annotation not available	Uncharacterized protein.	0.741
ENSGAFP00000001693	ENSGAFP00000007606	ENSGAFP00000001693	ENSGAFP00000007606	annotation not available	Sprouty homolog 4 (Drosophila).	0.536
ENSGAFP00000001693	ENSGAFP00000015299	ENSGAFP00000001693	ENSGAFP00000015299	annotation not available	Carbonic anhydrase XVI b.	0.537
ENSGAFP00000001693	ENSGAFP00000022498	ENSGAFP00000001693	ENSGAFP00000022498	annotation not available	Lumican.	0.623
ENSGAFP00000001693	GRIN3A	ENSGAFP00000001693	ENSGAFP00000006706	annotation not available	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.610
ENSGAFP00000001693	MCM7	ENSGAFP00000001693	ENSGAFP00000004478	annotation not available	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.620
ENSGAFP00000001693	RIMS2	ENSGAFP00000001693	ENSGAFP00000000455	annotation not available	Uncharacterized protein.	0.534
ENSGAFP00000007606	CCH79_00004118	ENSGAFP00000007606	ENSGAFP00000004920	Sprouty homolog 4 (Drosophila).	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.923