Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001700annotation not available (422 aa)    
Predicted Functional Partners:
ENSGAFP00000021072
Ribosomal protein S27a.
    
  0.478
DDX41
Uncharacterized protein.
    
  0.458
CCH79_00005491
Uncharacterized protein.
    
 0.458
H4C7
H4 clustered histone 7.
    
  0.456
ENSGAFP00000031850
Si:ch211-190p8.2.
    
  0.447
CCH79_00009991
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.445
ENSGAFP00000032282
annotation not available
    
 0.445
CCH79_00016534
F-BAR domain-containing protein.
    
  0.438
CCH79_00003400
Uncharacterized protein.
    
  0.438
ENSGAFP00000006885
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.437
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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