Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
CCH79_00007029Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
CCH79_00005104
DNA helicase; Belongs to the MCM family.
   
 0.999
ENSGAFP00000020980
Minichromosome maintenance complex component 2.
   
 0.999
CCH79_00014728
DNA helicase; Belongs to the MCM family.
   
 0.999
CCH79_00016050
Mcm10 domain-containing protein.
   
 0.999
CCH79_00005389
DNA helicase; Belongs to the MCM family.
   
 0.999
CCH79_00010478
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
   
 0.998
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 0.998
CCH79_00015144
ORC_WH_C domain-containing protein.
    
 0.998
CCH79_00000255
DNA helicase; Belongs to the MCM family.
   
 0.998
CCH79_00006882
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
 0.997
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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