Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016276Uncharacterized protein. (1512 aa)    
Predicted Functional Partners:
CCH79_00007090
Uncharacterized protein; Belongs to the actin family.
    
 0.963
CCH79_00007646
Bromo domain-containing protein.
    
 0.951
CCH79_00017513
SWIB domain-containing protein.
   
 0.946
ENSGAFP00000015439
Polybromo 1, like.
   
 0.946
ENSGAFP00000032131
Polybromo 1.
   
 0.946
CCH79_00010536
PHD-type domain-containing protein.
   
 0.945
CCH79_00019115
Uncharacterized protein.
   
 0.942
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.942
CCH79_00014322
RFX-type winged-helix domain-containing protein.
   
 0.941
CCH79_00006215
Bromo domain-containing protein.
    
 0.937
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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