Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH79_00001890SH3 domain-containing protein. (228 aa)    
Predicted Functional Partners:
ENSGAFP00000021076
Fibroblast growth factor binding protein 2b.
      
 0.687
CCH79_00006264
UDENN domain-containing protein.
      
 0.553
CCH79_00002696
Ig-like domain-containing protein.
      
 0.535
ENSGAFP00000009183
Secretogranin III.
      
 0.418
CCH79_00011950
Anti_prolifrtn domain-containing protein.
      
 0.417
CCH79_00010982
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
      
 0.403
CCH79_00006060
Thyroglobulin type-1 domain-containing protein.
      
 0.401
CCH79_00016159
Uncharacterized protein.
      
 0.401
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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