Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012225ANK_REP_REGION domain-containing protein. (530 aa)    
Predicted Functional Partners:
CCH79_00018586
Uncharacterized protein.
      
 0.639
CCH79_00013647
Synaptogyrin.
   
  
 0.543
CCH79_00009896
IFT81_CH domain-containing protein.
    
 0.533
CCH79_00018759
Uncharacterized protein.
   
 0.522
CCH79_00018077
Uncharacterized protein.
    
 0.516
CCH79_00019618
Uncharacterized protein.
    
 0.515
CCH79_00005441
Uncharacterized protein.
    
 0.506
ENSGAFP00000006737
Fibromodulin a.
   
 0.500
CCH79_00016476
ABC_transp_aux domain-containing protein.
    
 0.499
CCH79_00000617
Uncharacterized protein.
    
 0.494
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (38%) [HD]